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Five new Discodermolide analogues from the marine sponge Discodermia species
Title
Five new Discodermolide analogues from the marine sponge Discodermia species.
Creator
Gunasekera, Sarath P., Paul, Gopal K., Longley, Ross E., Isbrucker, Richard A., Pomponi, Shirley A.
Date Issued
2002
PURL
http://purl.flvc.org/FCLA/DT/3319106
Subject Headings
Sponges --Research, Cytotoxin, Marine natural products, Polyketides
Format
Document (PDF)
Neopeltolide a new macrolide from a lithistid sponge of the family Neopeltidae
Title
Neopeltolide a new macrolide from a lithistid sponge of the family Neopeltidae.
Creator
Wright, Amy E., Botelho, J. C., Guzman, Esther A., Harmody, Dedra K., Linley, P. A., McCarthy, Peter J., Pitts, Tara P., Pomponi, Shirley A., Reed, John K.
Date Issued
2007
PURL
http://purl.flvc.org/FCLA/DT/3333011
Subject Headings
Sponges, Macrolides, Marine natural products
Format
Document (PDF)
Molecular techniques reveal wide phyletic diversity of heterotrophic microbes associated with Discodermia spp. (Porifera: Demospongiae)
Title
Molecular techniques reveal wide phyletic diversity of heterotrophic microbes associated with Discodermia spp. (Porifera: Demospongiae).
Creator
Lopez, Jose V., McCarthy, Peter J., Janda, Kathleen E., Willoughby, Robin, Pomponi, Shirley A.
Date Issued
1999
PURL
http://purl.flvc.org/fau/fd/FA00007312
Subject Headings
Porifera, Demospongiae, Microbial diversity, Genes, rRNA, Symbiosis
Format
Document (PDF)
NOAA CIOERT Report: Survey of the Deep-Sea Coral and Sponge Ecosystem of Pourtalés. NOAA Ship Nancy Foster Florida Shelf-Edge Exploration II (FLoSEE) Cruise Leg 2-September 23-30, 2011. (NOAA Project Number: NF-11-09-CIOERT)
Title
NOAA CIOERT Report: Survey of the Deep-Sea Coral and Sponge Ecosystem of Pourtalés. NOAA Ship Nancy Foster Florida Shelf-Edge Exploration II (FLoSEE) Cruise Leg 2-September 23-30, 2011. (NOAA Project Number: NF-11-09-CIOERT).
Creator
Reed, John K., Farrington, Stephanie, David, Andrew, Messing, Charles G., Guzman, Esther A., Pomponi, Shirley A.
Date Issued
2012
PURL
http://purl.flvc.org/FCLA/DT/3340531
Subject Headings
Corals Ecology, Sponges Ecology, Cooperative Institute for Ocean Exploration, Research, and Technology (U.S.), United States. National Oceanic and Atmospheric Administration, Oceanography--Research, Florida, Straits of
Format
Document (PDF)
Isolation and characterization of niphatevirin, a human-immunodeficiency-virus-inhibitory glycoprotein from the marine sponge Niphates erecta.
Title
Isolation and characterization of niphatevirin, a human-immunodeficiency-virus-inhibitory glycoprotein from the marine sponge Niphates erecta.
Creator
O'Keefe, Barry R., Beutler, John A., Cardellina, John H., II, Gulakowski, Robert J., Krepps, Benjamin L., McMahon, James B., Sowder, Raymond C., II, Henderson, Louis E., Pannell, Lewis K., Pomponi, Shirley A., Boyd, Michael R.
Date Issued
1997
PURL
http://purl.flvc.org/FCLA/DT/3174088
Subject Headings
Sponges, Sponges--Anatomy
Format
Document (PDF)
Diversity and bathymetric distribution of lithistid sponges in the tropical western Atlantic region
Title
Diversity and bathymetric distribution of lithistid sponges in the tropical western Atlantic region.
Creator
Pomponi, Shirley A., Kelly-Borges, M., Reed, John K., Wright, Amy E.
Date Issued
2001
PURL
http://purl.flvc.org/FCLA/DT/3321239
Subject Headings
Sponges, Demospongiae, Porifera
Format
Document (PDF)
Isolation, synthesis, and biological activity of Aphrocallistin, an adenine-substituted bromotyramine metabolite from the hexactinellida sponge Aphrocallistes beatrix
Title
Isolation, synthesis, and biological activity of Aphrocallistin, an adenine-substituted bromotyramine metabolite from the hexactinellida sponge Aphrocallistes beatrix.
Creator
Wright, Amy E., Roth, G. P., Hoffman, J. K., Divlianska, D. B., Pechter, D., Sennett, Susan H., Guzman, Esther A., Linley, P. A., McCarthy, Peter J., Pitts, Tara P., Pomponi, Shirley A., Reed, John K.
Date Issued
2009
PURL
http://purl.flvc.org/FCLA/DT/3319109
Subject Headings
Sponges --Research, Marine metabolites, Marine natural products, Hexactinellida
Format
Document (PDF)
A systematic revision of the central west Atlantic Halichondrida (Demospongiae,Porifera). Part III: Description of valid species
Title
A systematic revision of the central west Atlantic Halichondrida (Demospongiae,Porifera). Part III: Description of valid species.
Creator
Diaz, Maria Cristina, Pomponi, Shirley A., Van Soest, Rob W. M.
Date Issued
1993
PURL
http://purl.flvc.org/fau/fd/FA00007221
Subject Headings
Halichondrida, Demospongiae, Porifera, Atlantic Ocean, Animals--Classification
Format
Document (PDF)
Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes
Title
Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes.
Creator
Hill, Malcolm S., Hill, April L., Lopez, Jose V., Peterson, Kevin J., Pomponi, Shirley A., Diaz, Maria Cristina, Thacker, Robert W., Adamska, Maja, Boury-Esnault, Nicole, Cárdenas, Paco, Chaves-Fonnegra, Andia, Danka, Elizabeth, De Laine, Bre-Onna, Formica, Dawn, Hajdu, Eduardo, Lobo-Hajdu, Gisele, Klontz, Sarah, Morrow, Christine C., Patel, Jignasa, Picton, Bernard, Pisani, Davide, Pohlmann, Deborah, Redmond, Niamh E., Reed, John K., Richey, Stacy, Riesgo, Ana, Rubin, Ewelina, Russell, Zach, Rützler, Klaus, Sperling, Erik A., di Stefano, Michael, Tarver, James E., Collins, Allen G., Lin, Senjie
Abstract/Description
Background: Demosponges are challenging for phylogenetic systematics because of their plastic and relatively simple morphologies and many deep divergences between major clades. To improve understanding of the phylogenetic relationships within Demospongiae, we sequenced and analyzed seven nuclear housekeeping genes involved in a variety of cellular functions from a diverse group of sponges. Methodology/Principal Findings: We generated data from each of the four sponge classes (i.e., Calcarea,...
Show moreBackground: Demosponges are challenging for phylogenetic systematics because of their plastic and relatively simple morphologies and many deep divergences between major clades. To improve understanding of the phylogenetic relationships within Demospongiae, we sequenced and analyzed seven nuclear housekeeping genes involved in a variety of cellular functions from a diverse group of sponges. Methodology/Principal Findings: We generated data from each of the four sponge classes (i.e., Calcarea, Demospongiae, Hexactinellida, and Homoscleromorpha), but focused on family-level relationships within demosponges. With data for 21 newly sampled families, our Maximum Likelihood and Bayesian-based approaches recovered previously phylogenetically defined taxa: Keratosap, Myxospongiaep, Spongillidap, Haploscleromorphap (the marine haplosclerids) and Democlaviap. We found conflicting results concerning the relationships of Keratosap and Myxospongiaep to the remaining demosponges, but our results strongly supported a clade of Haploscleromorphap+Spongillidap+Democlaviap. In contrast to hypotheses based on mitochondrial genome and ribosomal data, nuclear housekeeping gene data suggested that freshwater sponges (Spongillidap) are sister to Haploscleromorphap rather than part of Democlaviap. Within Keratosap, we found equivocal results as to the monophyly of Dictyoceratida. Within Myxospongiaep, Chondrosida and Verongida were monophyletic. A wellsupported clade within Democlaviap, Tetractinellidap, composed of all sampled members of Astrophorina and Spirophorina (including the only lithistid in our analysis), was consistently revealed as the sister group to all other members of Democlaviap. Within Tetractinellidap, we did not recover monophyletic Astrophorina or Spirophorina. Our results also reaffirmed the monophyly of order Poecilosclerida (excluding Desmacellidae and Raspailiidae), and polyphyly of Hadromerida and Halichondrida. Conclusions/Significance: These results, using an independent nuclear gene set, confirmed many hypotheses based on ribosomal and/or mitochondrial genes, and they also identified clades with low statistical support or clades that conflicted with traditional morphological classification. Our results will serve as a basis for future exploration of these outstanding questions using more taxon- and gene-rich datasets.
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Date Issued
2013-01-23
PURL
http://purl.flvc.org/fau/fd/FAUIR000044
Format
Citation
A systematic revision of the Central-Atlantic Halichondrida (Demospongiae, Porifera). Part I: Evaluation of characters and diagnosis of genera
Title
A systematic revision of the Central-Atlantic Halichondrida (Demospongiae, Porifera). Part I: Evaluation of characters and diagnosis of genera.
Creator
Diaz, Maria Cristina, Van Soest, Rob W. M., Pomponi, Shirley A.
Date Issued
1991
PURL
http://purl.flvc.org/FCLA/DT/3333130
Subject Headings
Halichondrida, Demospongiae--Classification, Halichondriidae, Hymeniacidonidae
Format
Document (PDF)
A systematic revision of the Central Atlantic Halichondrida (Demospongiae, Porifera). Part II. Patterns of distribution of secondary metabolites
Title
A systematic revision of the Central Atlantic Halichondrida (Demospongiae, Porifera). Part II. Patterns of distribution of secondary metabolites.
Creator
Pomponi, Shirley A., Wright, Amy E., Diaz, Maria Cristina, Van Soest, Rob W. M.
Date Issued
1991
PURL
http://purl.flvc.org/FCLA/DT/3333131
Subject Headings
Halichondrida, Secondary metabolites, Demospongiae--Classification
Format
Document (PDF)
Phylogenetic classification of the halichondrids (Porifera, Demospongiae)
Title
Phylogenetic classification of the halichondrids (Porifera, Demospongiae).
Creator
Van Soest, Rob W. M., Diaz, Maria Cristina, Pomponi, Shirley A.
Date Issued
1990
PURL
http://purl.flvc.org/fau/fd/FA00007404
Subject Headings
Cladistic analysis, Halichondrida, Demospongiae, Chemotaxonomy, Phylogeny
Format
Document (PDF)
Use of real-time qPCR to quantify members of the unculturable heterotrophic bacterial community in a deep sea marine sponge, Vetulina sp
Title
Use of real-time qPCR to quantify members of the unculturable heterotrophic bacterial community in a deep sea marine sponge, Vetulina sp.
Creator
Cassler, M., Peterson, C. L., Ledger, Angela, Pomponi, Shirley A., Wright, Amy E., Winegar, R., McCarthy, Peter J., Lopez, Jose V.
Date Issued
2008
PURL
http://purl.flvc.org/FCLA/DT/2708323
Subject Headings
Microbiology --Research, Sponges --Microbiology, Marine biology --Caribbean Area
Format
Document (PDF)
Identification of the bacterial symbiont Entotheonella sp. in the mesohyl of the marine sponge Discodermia sp
Title
Identification of the bacterial symbiont Entotheonella sp. in the mesohyl of the marine sponge Discodermia sp.
Creator
Bruck, W. M., Sennett, Susan H., Pomponi, Shirley A., Willenz, P., McCarthy, Peter J.
Date Issued
2008
PURL
http://purl.flvc.org/FCLA/DT/3183806
Subject Headings
Bacteria Ecology, Symbiosis, Sponges
Format
Document (PDF)
Marine biotechnology: realizing the potential
Title
Marine biotechnology: realizing the potential.
Creator
Pomponi, Shirley A., Baden, Daniel G., Zohar, Y.
Date Issued
2007
PURL
http://purl.flvc.org/FCLA/DT/3338530
Subject Headings
Marine biotechnology, Marine pharmacology, Marine natural products
Format
Document (PDF)
Three new peroxides from the sponge Plakinastrella species
Title
Three new peroxides from the sponge Plakinastrella species.
Creator
Chen, Ying, Killday, K. B., McCarthy, Peter J., Schimoler, Rebecca, Chilson, Katherine, Selitrennikoff, Claude, Pomponi, Shirley A., Wright, Amy E.
Date Issued
2001
PURL
http://purl.flvc.org/FCLA/DT/3319103
Subject Headings
Sponges --Research, Spectral analysis, Marine natural products, Peroxides, Antifungal agents
Format
Document (PDF)
Preliminary cruise report: Submersible and scuba collections in the coastal waters of Honduras, the Bay Islands: Biomedical and biodiversity research of the benthic communities with emphasis on the porifera, algae and gorgonacea
Title
Preliminary cruise report: Submersible and scuba collections in the coastal waters of Honduras, the Bay Islands: Biomedical and biodiversity research of the benthic communities with emphasis on the porifera, algae and gorgonacea.
Creator
Reed, John K., Pomponi, Shirley A., Hanisak, M. Dennis, Wright, Amy E., Janda, Kathleen E., Pitts, Tara P., Willoughby, Robin, Killday, K. B., Robertson, Lynn, Lopez, Jose V., Kelly-Borges, Klaus, Overdorf, Laura S., Monaghan, Pat
Date Issued
1997-12-15
PURL
http://purl.flvc.org/fcla/dt/3359259
Subject Headings
Honduras, Biomedical Research, Biodiversity--Research
Format
Document (PDF)
Sponge cell culture
Title
Sponge cell culture.
Creator
Pomponi, Shirley A., Willoughby, Robin, Kelly-Borges, M.
Date Issued
1998
PURL
http://purl.flvc.org/fau/fd/FA00007453
Subject Headings
Sponges, Sponges--Cytology, Cell culture
Format
Document (PDF)
Sponge cell culture for production of bioactive metabolites.
Title
Sponge cell culture for production of bioactive metabolites.
Creator
Pomponi, Shirley A., Willoughby, Robin
Date Issued
1994
PURL
http://purl.flvc.org/fau/fd/FA00007381
Subject Headings
Sponges, Cell culture, Metabolites, Bioactive compounds
Format
Document (PDF)
New sterol ester from a deep water marine sponge, Xestospongia sp.
Title
New sterol ester from a deep water marine sponge, Xestospongia sp.
Creator
Gunasekera, Sarath P., Cranick, S., Pomponi, Shirley A.
Date Issued
1991
PURL
http://purl.flvc.org/FCLA/DT/3332980
Subject Headings
Sponges, Sterols, Marine natural products
Format
Document (PDF)

Pages