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Pages
- Title
- Mapping, habitat characterization, and fish surveys of the deep-water Oculina coral reef Marine Protected Area: a review of historical and current research.
- Creator
- Reed, John K., Shepard, Andrew N., Koenig, Christopher C., Scanlon, Kathryn M., Gilmore, R. G.
- Date Issued
- 2005
- PURL
- http://purl.flvc.org/FCLA/DT/3172802
- Subject Headings
- Oculinidae, Marine biodiversity conservation, Marine resources conservation, Mapping, Habitat conservation, Fish surveys
- Format
- Document (PDF)
- Title
- South Atlantic MPAs and Oculina HAPC: Characterization of Fish Communities, Benthic Habitat, and Benthic Macrobiota: Final Report for 2015-2017 NOAA Ship Pisces Cruises (15-02, 16-20, 17-02).
- Creator
- Reed, John K., Harter, Stacey, Farrington, Stephanie, David, Andrew
- Date Issued
- 2018-06-27
- PURL
- http://purl.flvc.org/fau/fd/FAUIR000240
- Format
- Citation
- Title
- Antimicrobial constituent of the brown alga Sporochnus pedunculatus.
- Creator
- Gunasekera, L. S., Wright, Amy E., Gunasekera, Sarath P., McCarthy, Peter J., Reed, John K.
- Date Issued
- 1995
- PURL
- http://purl.flvc.org/fau/fd/FA00007231
- Subject Headings
- Brown algae, Antimicrobial agents, Nuclear magnetic resonance, Candida albicans, Bacillus subtilis
- Format
- Document (PDF)
- Title
- Characterization of the Mesophotic Benthic Habitat and Fish Assemblagesfrom ROV Dives on Pulley Ridge and Tortugas during 2012 and 2013 R/V Walton SmithCruises.
- Creator
- Farrington, Stephanie, Reed, John K., Moe, Heather, Harter, Stacey, Hanisak, M. Dennis, David, Andrew, Harbor Branch Oceanographic Institute
- Date Issued
- 2014
- PURL
- http://purl.flvc.org/fau/fd/FA00007508
- Subject Headings
- Pulley Ridge, Dry Tortugas (Fla.), Underwater exploration, Benthos Habitat, Coral communities, Fish populations
- Format
- Document (PDF)
- Title
- Neopeltolide a new macrolide from a lithistid sponge of the family Neopeltidae.
- Creator
- Wright, Amy E., Botelho, J. C., Guzman, Esther A., Harmody, Dedra K., Linley, P. A., McCarthy, Peter J., Pitts, Tara P., Pomponi, Shirley A., Reed, John K.
- Date Issued
- 2007
- PURL
- http://purl.flvc.org/FCLA/DT/3333011
- Subject Headings
- Sponges, Macrolides, Marine natural products
- Format
- Document (PDF)
- Title
- Final cruise report: Submersible and scuba collections around little Bahama Bank, Bahama Islands.
- Creator
- Reed, John K., Wright, Amy E., Willoughby, Robin, Janda, Kathleen E., Pitts, Tara P., Robertson, Lynn, Scarpa, Sandra, McElroy, Melanie
- Date Issued
- 1997-01-23
- PURL
- http://purl.flvc.org/fcla/dt/3359256
- Subject Headings
- Biomedical research, Biodiversity--Research, Porifera, Gorgonacea, Bahamas
- Format
- Document (PDF)
- Title
- Final Report: Siting study for a hydrokinetic energy project located offshore southeastern Florida: protocols for survey methodology for offshore marine hydrokinetic energy projects.
- Creator
- Vinick, C., Riccobono, A., Messing, Charles G., Walker, Brian K., Reed, John K., Rogers, S.
- Date Issued
- 2012
- PURL
- http://purl.flvc.org/FCLA/DT/3340533
- Subject Headings
- Ocean energy resources, Renewable energy, Geophysical surveys
- Format
- Document (PDF)
- Title
- NOAA CIOERT Report: Survey of the Deep-Sea Coral and Sponge Ecosystem of Pourtalés. NOAA Ship Nancy Foster Florida Shelf-Edge Exploration II (FLoSEE) Cruise Leg 2-September 23-30, 2011. (NOAA Project Number: NF-11-09-CIOERT).
- Creator
- Reed, John K., Farrington, Stephanie, David, Andrew, Messing, Charles G., Guzman, Esther A., Pomponi, Shirley A.
- Date Issued
- 2012
- PURL
- http://purl.flvc.org/FCLA/DT/3340531
- Subject Headings
- Corals Ecology, Sponges Ecology, Cooperative Institute for Ocean Exploration, Research, and Technology (U.S.), United States. National Oceanic and Atmospheric Administration, Oceanography--Research, Florida, Straits of
- Format
- Document (PDF)
- Title
- Diversity and bathymetric distribution of lithistid sponges in the tropical western Atlantic region.
- Creator
- Pomponi, Shirley A., Kelly-Borges, M., Reed, John K., Wright, Amy E.
- Date Issued
- 2001
- PURL
- http://purl.flvc.org/FCLA/DT/3321239
- Subject Headings
- Sponges, Demospongiae, Porifera
- Format
- Document (PDF)
- Title
- Deep-water benthic habitat characterization and cable impact assessment for the South Florida Ocean Measurement Facility (SFOMF). Report to Naval Surface Warfare Center, Carderock Division.
- Creator
- Messing, Charles G., Walker, Brian K., Reed, John K., Harbor Branch Oceanographic Institute
- Date Issued
- 2012
- PURL
- http://purl.flvc.org/fau/fd/FA00007525
- Subject Headings
- Benthos Habitat, Fiber optic cables, Environmental impact analysis
- Format
- Document (PDF)
- Title
- Production and off-bank transport of carbonate sediment, black rock, southwest Little Bahama Bank.
- Creator
- Hoskin, Charles M., Reed, John K., Mook, David H.
- Date Issued
- 1986
- PURL
- http://purl.flvc.org/FCLA/DT/3353776
- Subject Headings
- Little Bahama Bank (Bahamas), Sediments (Geology), Carbonates, Echinometra lucunter, Halimeda, Chitons
- Format
- Document (PDF)
- Title
- Sediments from a living shelf-edge reef and adjacent area off central eastern Florida.
- Creator
- Hoskin, Charles M., Reed, John K., Mook, David H.
- Date Issued
- 1987
- PURL
- http://purl.flvc.org/fau/fd/FA00007444
- Subject Headings
- East Florida, Oculinidae, Sediments (Geology), Coral reefs and islands--Florida
- Format
- Document (PDF)
- Title
- Isolation, synthesis, and biological activity of Aphrocallistin, an adenine-substituted bromotyramine metabolite from the hexactinellida sponge Aphrocallistes beatrix.
- Creator
- Wright, Amy E., Roth, G. P., Hoffman, J. K., Divlianska, D. B., Pechter, D., Sennett, Susan H., Guzman, Esther A., Linley, P. A., McCarthy, Peter J., Pitts, Tara P., Pomponi, Shirley A., Reed, John K.
- Date Issued
- 2009
- PURL
- http://purl.flvc.org/FCLA/DT/3319109
- Subject Headings
- Sponges --Research, Marine metabolites, Marine natural products, Hexactinellida
- Format
- Document (PDF)
- Title
- Reconstruction of Family-Level Phylogenetic Relationships within Demospongiae (Porifera) Using Nuclear Encoded Housekeeping Genes.
- Creator
- Hill, Malcolm S., Hill, April L., Lopez, Jose V., Peterson, Kevin J., Pomponi, Shirley A., Diaz, Maria Cristina, Thacker, Robert W., Adamska, Maja, Boury-Esnault, Nicole, Cárdenas, Paco, Chaves-Fonnegra, Andia, Danka, Elizabeth, De Laine, Bre-Onna, Formica, Dawn, Hajdu, Eduardo, Lobo-Hajdu, Gisele, Klontz, Sarah, Morrow, Christine C., Patel, Jignasa, Picton, Bernard, Pisani, Davide, Pohlmann, Deborah, Redmond, Niamh E., Reed, John K., Richey, Stacy, Riesgo, Ana, Rubin, Ewelina, Russell, Zach, Rützler, Klaus, Sperling, Erik A., di Stefano, Michael, Tarver, James E., Collins, Allen G., Lin, Senjie
- Abstract/Description
-
Background: Demosponges are challenging for phylogenetic systematics because of their plastic and relatively simple morphologies and many deep divergences between major clades. To improve understanding of the phylogenetic relationships within Demospongiae, we sequenced and analyzed seven nuclear housekeeping genes involved in a variety of cellular functions from a diverse group of sponges. Methodology/Principal Findings: We generated data from each of the four sponge classes (i.e., Calcarea,...
Show moreBackground: Demosponges are challenging for phylogenetic systematics because of their plastic and relatively simple morphologies and many deep divergences between major clades. To improve understanding of the phylogenetic relationships within Demospongiae, we sequenced and analyzed seven nuclear housekeeping genes involved in a variety of cellular functions from a diverse group of sponges. Methodology/Principal Findings: We generated data from each of the four sponge classes (i.e., Calcarea, Demospongiae, Hexactinellida, and Homoscleromorpha), but focused on family-level relationships within demosponges. With data for 21 newly sampled families, our Maximum Likelihood and Bayesian-based approaches recovered previously phylogenetically defined taxa: Keratosap, Myxospongiaep, Spongillidap, Haploscleromorphap (the marine haplosclerids) and Democlaviap. We found conflicting results concerning the relationships of Keratosap and Myxospongiaep to the remaining demosponges, but our results strongly supported a clade of Haploscleromorphap+Spongillidap+Democlaviap. In contrast to hypotheses based on mitochondrial genome and ribosomal data, nuclear housekeeping gene data suggested that freshwater sponges (Spongillidap) are sister to Haploscleromorphap rather than part of Democlaviap. Within Keratosap, we found equivocal results as to the monophyly of Dictyoceratida. Within Myxospongiaep, Chondrosida and Verongida were monophyletic. A wellsupported clade within Democlaviap, Tetractinellidap, composed of all sampled members of Astrophorina and Spirophorina (including the only lithistid in our analysis), was consistently revealed as the sister group to all other members of Democlaviap. Within Tetractinellidap, we did not recover monophyletic Astrophorina or Spirophorina. Our results also reaffirmed the monophyly of order Poecilosclerida (excluding Desmacellidae and Raspailiidae), and polyphyly of Hadromerida and Halichondrida. Conclusions/Significance: These results, using an independent nuclear gene set, confirmed many hypotheses based on ribosomal and/or mitochondrial genes, and they also identified clades with low statistical support or clades that conflicted with traditional morphological classification. Our results will serve as a basis for future exploration of these outstanding questions using more taxon- and gene-rich datasets.
Show less - Date Issued
- 2013-01-23
- PURL
- http://purl.flvc.org/fau/fd/FAUIR000044
- Format
- Citation
- Title
- Deepsea coral collection protocols: a synthesis of field experience from deep-sea coral researchers, designed to build our national capacity to document deep-sea coral diversity.
- Creator
- Etnoyer, P., Cairns, S. D., Sanchez, J. A., Reed, John K., Lopez, Jose V., Schroeder, W. W., Brooke, S. D., Watling, L., Baco-Taylor, A., Williams, G. C., Lindner, A., France, Scott C., Bruckner, A. W.
- Date Issued
- 2006
- PURL
- http://purl.flvc.org/FCLA/DT/3172990
- Subject Headings
- Deep sea corals, Corals --Collection and preservation, Deep-sea ecology, Octocorallia, Coral reef conservation
- Format
- Document (PDF)
- Title
- South Atlantic MPAs and Deepwater Coral HAPCs: Characterization of Benthic Habitat and Fauna.
- Creator
- Harter, Stacey, David, Andrew, Reed, John K., Harbor Branch Oceanographic Institute
- Date Issued
- 2014
- PURL
- http://purl.flvc.org/fau/fd/FA00007507
- Subject Headings
- Marine parks and reserves, Deep sea corals, Benthos Habitat, Benthic animals, Underwater exploration
- Format
- Document (PDF)
- Title
- South Atlantic MPAs and Deepwater Coral HAPCs: Characterization of Benthic Habitat and Fauna.
- Creator
- Harter, Stacey, David, Andrew, Reed, John K., Harbor Branch Oceanographic Institute
- Date Issued
- 2013
- PURL
- http://purl.flvc.org/fau/fd/FA00007506
- Subject Headings
- Marine parks and reserves, Deep sea corals, Benthos Habitat, Benthic animals, Underwater exploration
- Format
- Document (PDF)
- Title
- Semi-annual report. South Atlantic shelf-edge MPAs and Oculina Experimental Closed Area. Summary of accomplishments, April 2015 to September 30, 2015. Project ID#: NA14NMF441049. Report to SAFMC and NOAA.
- Creator
- Harter, Stacey, David, Andrew, Reed, John K., Harbor Branch Oceanographic Institute
- Date Issued
- 2015
- PURL
- http://purl.flvc.org/fau/fd/FA00007517
- Subject Headings
- Marine parks and reserves, Deep sea corals, Oculinidae, Benthos Habitat
- Format
- Document (PDF)
- Title
- Molecular evidence for multiple lineages in the gorgonian family Plexauridae (Anthozoa: Octocorallia).
- Creator
- Wirshing, H. H., Messing, Charles G., Douady, C. J., Reed, John K., Stanhope, M. J., Shivji, M. S.
- Date Issued
- 2005
- PURL
- http://purl.flvc.org/FCLA/DT/2796046
- Subject Headings
- Octocorallia, Anthozoa, Fossil, Paleontology --Paleozoic, Corals --Anatomy, Gorgonidae
- Format
- Document (PDF)
- Title
- Leiodermatolide, a potent antimitotic macrolide from the marine sponge Leiodermatium sp.
- Creator
- Paterson, Ian, Dalby, S. M., Roberts, J. C., Naylor, G. J., Guzman, Esther A., Isbrucker, Richard A., Pitts, Tara P., Linley, P. A., Divlianska, D. B., Reed, John K., Wright, Amy E.
- Date Issued
- 2011
- PURL
- http://purl.flvc.org/fau/fd/FA00007465
- Subject Headings
- Antimitotic Agents, Macrolides, Sponges, Molecular structure, Nuclear Magnetic Resonance, Biomolecular, Cell lines
- Format
- Document (PDF)