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Title: Effects of natural and artificial Thalassia on rates of sedimentation.
Creator: Almasi, M. N., Hoskin, Charles M., Reed, John K.
Date Issued: 1987
PURL: http://purl.flvc.org/fau/fd/FA00007149
Subject Headings: Sedimentation and deposition, Thalassia, Turtle grass, Seagrasses
Format: Document (PDF)

Title: Summary of seafloor mapping and benthic sampling in 200-2000m, from North Carolina through Florida.
Creator: Arendt, M. D., Barans, C. A., Sedberry, G. R., Van Dolah, R. F., Reed, John K., Ross, S. W.
Date Issued: 2003
PURL: http://purl.flvc.org/FCLA/DT/3318904
Subject Headings: Submarine topography--Atlantic Coast (U.S.)--Maps, Ocean bottom--Maps, Benthos--Habitat--Maps, Benthos--Sampling
Format: Document (PDF)

Title: Spawning aggregation of beardfish Polymixia lowei, in adeep-water sinkhole off the Florida Keys.
Creator: Baumberger, Rex E., Jr., Brown-Peterson, N. J., Reed, John K., Gilmore, R. G.
Date Issued: 2010
PURL: http://purl.flvc.org/fau/fd/FA00007111
Subject Headings: Florida Keys (Fla.), Beardfishes, Polymixiidae, Spawning, Sinkholes, Johnson-Sea-Link II (Submarine)
Format: Document (PDF)

Title: Proposed HAPC/MPA for deepwater Lophelia coral habitat and essential fish habitat in the eastern Gulf of Mexico. Presented to GOMFC- Coral Group Meeting Webinar, Dec. 4, 2014.
Creator: Brooke, S. D., Etnoyer, P., Reed, John K., Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007519
Subject Headings: Marine habitat conservation, Lophelia, Marine parks and reserves Mexico
Format: Document (PDF)

Title: Comparison of the anaerobic microbiota of deep-water Geodia spp. and sandy sediments in the Straits of Florida.
Creator: Bruck, W. M., Bruck, T. B., Self, W. T., Reed, John K., Nitecki, S. S., McCarthy, Peter J.
Date Issued: 2010
PURL: http://purl.flvc.org/FCLA/DT/3351982
Subject Headings: Microbial ecology, Marine sediments, Florida, Straits of, Fluorescence in situ hybridization, Sponges
Format: Document (PDF)

Title: Variability of cold-water coral mounds in a high sediment input and tidal current regime, Straits ofFlorida.
Creator: Correa, T.B.S., Grasmueck, M., Eberli, G.P., Reed, John K., Verwer, K., Purkis, S.
Date Issued: 2012
PURL: http://purl.flvc.org/fau/fd/FA00007166
Subject Headings: Florida, Straits of, Cold-water corals, Deep sea corals, Submersibles--Automatic control, Underwater vehicles, Great Bahama Bank (Bahamas), Morphology
Format: Document (PDF)

Title: A cembranolide diterpene farnesyl protein transferase inhibitor from the marine soft coral Lobophytum cristagalli.
Creator: Coval, S. J., Patton, R. W., Petrin, J. M., James, L., Rothofsky, M. L., Lin, S. L., Patel, Mahesh, Reed, John K., McPhail, A. T., Bishop, W. R.
Date Issued: 1996
PURL: http://purl.flvc.org/FCLA/DT/3331913
Subject Headings: Corals, Alcyoniidae, Ras proteins, Diterpenes, Antineoplastic agents
Format: Document (PDF)

Title: Morphological Diagnoses of Sponges Collected at Shelf-edge MPAs from Eastern Florida to North Carolina, between depths of 51 and 150 m, during CIOERT Expeditions (2018-2019).
Creator: Diaz Ronda, Maria Cristina, Farrington, Stephanie, Reed, John K., Pomponi, Shirley A.
Abstract/Description: This paper is a result of the taxonomic analyses of the sponges collected during the NOAA Ship Pisces expeditions in 2018 and 2019 with the University of North Carolina, Wilmington (UNCW) Mohawk ROV. This is part of a 9-year project conducted by NOAA National Marine Fisheries (NMF) in collaboration with the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) to document and monitor the...
Show moreThis paper is a result of the taxonomic analyses of the sponges collected during the NOAA Ship Pisces expeditions in 2018 and 2019 with the University of North Carolina, Wilmington (UNCW) Mohawk ROV. This is part of a 9-year project conducted by NOAA National Marine Fisheries (NMF) in collaboration with the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) to document and monitor the Marine Protected Areas (MPAs) of the southeastern U.S. continental shelf (eastern Florida to North Carolina, 50-165 m deep). The most prominent and conspicuous sponges were collected with the intention of evaluating the biodiversity of this important benthic group in these mesophotic habitats. Eleven sponge samples were collected, and taxonomic evaluation, studying the internal and external morphology, resulted in: 1) three well recognized species from the Tropical Western Atlantic (Leiodermatium lynceus, Neofibularia nolitangere, Clathria foliacea), 2) four species with sibling recognized species but with major morphological differences that might require the description of new species (Epipolasis cf. profunda, Cliona cf. tumula, Cliona aff. celata), and 3) three species that only could receive generic assignations (Penares sp.1, Clathria sp.1, and Aaptos sp.1). These results show that more than half of the species collected represent unknown species to science, or unknown variations of recognized species. Careful comparison with species types and observations of spicules under SEM would allow the necessary evidence to characterize and classify these new species or varieties. We suggest further characterization of these novel fauna considering their level of abundance and distribution in the MPAs studied. A synoptic description of each species studied, with live, deck and microscopy photographs is here presented.
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Date Issued: 2018 - 2019
PURL: http://purl.flvc.org/fau/fd/FAUIR000407
Format: Document (PDF)

Title: CUBA’S MESOPHOTIC CORAL REEFS Sponge Photo Identification Guide 1st Edition.
Creator: Diaz, Maria Cristina, Pomponi, Shirley A., Reed, John K., Busutil, Linnet, Garcia-Hernandez, Maria Rosa
Abstract/Description: Mesophotic coral reef ecosystems (MCEs) are light-dependent benthic communities that occur deeper than shallow reefs and typically range from depths of 30 m to the bottom of the photic zone, which may extend to >150 m in some regions. MCEs represent in part an extension of shallow-water coral reef ecosystems and support a diverse assemblages of habitat-building taxa, including corals, sponges and algae, and associated fish (Reed et al., 2018). Many MCEs worldwide appear to be thriving...
Show moreMesophotic coral reef ecosystems (MCEs) are light-dependent benthic communities that occur deeper than shallow reefs and typically range from depths of 30 m to the bottom of the photic zone, which may extend to >150 m in some regions. MCEs represent in part an extension of shallow-water coral reef ecosystems and support a diverse assemblages of habitat-building taxa, including corals, sponges and algae, and associated fish (Reed et al., 2018). Many MCEs worldwide appear to be thriving compared to shallow reefs. The deep reef refugia hypothesis suggests that MCEs may be less impacted from natural and anthropogenic impacts than shallow coral reefs, and may be more stable and resilient than shallow reefs. MCEs may also act as refugia for shallow reef species through the export of fish and coral larvae. However, it is now apparent that MCEs are also vulnerable to disturbances from all facets of perturbations including climate change, bottom trawling, invasive species, and pollution. Whereas considerable data have been reported regarding the distribution, ecology, and health of Cuba’s shallow reefs, relatively little is known about the distribution, community structure and health of Cuba’s deep mesophotic reefs. Cuba’s strong marine policies and legislation has already resulted in 105 MPAs, covering nearly 25% of its insular shelf, yet overfishing, poaching, pollution and global warming are threats to these vulnerable ecosystems, as reefs worldwide are threatened.
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Date Issued: 2019
PURL: http://purl.flvc.org/fau/fd/FAUIR000405
Format: Document (PDF)

Title: Deepsea coral collection protocols: a synthesis of field experience from deep-sea coral researchers, designed to build our national capacity to document deep-sea coral diversity.
Creator: Etnoyer, P., Cairns, S. D., Sanchez, J. A., Reed, John K., Lopez, Jose V., Schroeder, W. W., Brooke, S. D., Watling, L., Baco-Taylor, A., Williams, G. C., Lindner, A., France, Scott C., Bruckner, A. W.
Date Issued: 2006
PURL: http://purl.flvc.org/FCLA/DT/3172990
Subject Headings: Deep sea corals, Corals --Collection and preservation, Deep-sea ecology, Octocorallia, Coral reef conservation
Format: Document (PDF)

Title: Characterization of the Mesophotic Benthic Habitat and Fish Assemblagesfrom ROV Dives on Pulley Ridge and Tortugas during 2012 and 2013 R/V Walton SmithCruises.
Creator: Farrington, Stephanie, Reed, John K., Moe, Heather, Harter, Stacey, Hanisak, M. Dennis, David, Andrew, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007508
Subject Headings: Pulley Ridge, Dry Tortugas (Fla.), Underwater exploration, Benthos Habitat, Coral communities, Fish populations
Format: Document (PDF)

Title: Photo album and taxonomy of benthic macrobiota from 2012-2013 ROV dives on Pulley Ridge mesophotic reefs.
Creator: Farrington, Stephanie, Reed, John K., Hanisak, M. Dennis, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007510
Subject Headings: Pulley Ridge, Benthos, Cnidaria--Classification, Coral reefs
Format: Document (PDF)

Title: Connectivity of the Pulley Ridge - South Florida Coral Reef Ecosystem:Processes to Decision-Support Tools.
Creator: Farrington, Stephanie, Reed, John K., Hanisak, M. Dennis, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007509
Subject Headings: Pulley Ridge, Coral reef ecology--Florida, Underwater exploration
Format: Document (PDF)

Title: Ecosystem-based fisheries management of seamount and deep-sea coral reefs in U.S. waters: conceptual models for proactive decisions.
Creator: George, R. Y., Okey, T. A., Reed, John K.
Date Issued: 2007
PURL: http://purl.flvc.org/FCLA/DT/3177165
Subject Headings: Fishery management, Deep sea corals, Marine ecology--United States
Format: Document (PDF)

Title: Early larval stages of the Indo-Pacific coral gall-forming crab Hapalocarcinus marsupialis Stimpson, 1859 (Brachyura, Hapalocarcinidae) cultured in the laboratory.
Creator: Gore, R. H., Scotto, L. E., Reed, John K.
PURL: http://purl.flvc.org/FCLA/DT/3336701
Subject Headings: Hapalocarcinus, Brachyura, Hapalocarcinidae, Crabs--Larvae, Scleractinian corals
Format: Document (PDF)

Title: Antimicrobial constituent of the brown alga Sporochnus pedunculatus.
Creator: Gunasekera, L. S., Wright, Amy E., Gunasekera, Sarath P., McCarthy, Peter J., Reed, John K.
Date Issued: 1995
PURL: http://purl.flvc.org/fau/fd/FA00007231
Subject Headings: Brown algae, Antimicrobial agents, Nuclear magnetic resonance, Candida albicans, Bacillus subtilis
Format: Document (PDF)

Title: Plakolide A, a New γ‐Lactone from the Marine Sponge Plakortis sp.
Creator: Gunasekera, Sarath P., Isbrucker, Richard A., Longley, Ross E., Wright, Amy E., Pomponi, Shirley A., Reed, John K.
Date Issued: 2004
PURL: http://purl.flvc.org/FCLA/DT/3164104
Subject Headings: Sponges, Lactones, Acids, Nitric-oxide synthase, Nuclear magnetic resonance spectroscopy
Format: Document (PDF)

Title: Use of photogrammetric techniques to monitor coral reef recovery following a major ship grounding.
Creator: Hanisak, M. Dennis, Blair, Stephen M., Reed, John K.
Date Issued: 1989
PURL: http://purl.flvc.org/fau/fd/FA00007250
Subject Headings: Photogrammetry, Coral reef restoration, Florida Keys National Marine Sanctuary (Fla.)
Format: Document (PDF)

Title: South Atlantic MPAs and Deepwater Coral HAPCs: Characterization of Benthic Habitat and Fauna.
Creator: Harter, Stacey, David, Andrew, Reed, John K., Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007507
Subject Headings: Marine parks and reserves, Deep sea corals, Benthos Habitat, Benthic animals, Underwater exploration
Format: Document (PDF)

Title: South Atlantic MPAs and Deepwater Coral HAPCs: Characterization of Benthic Habitat and Fauna.
Creator: Harter, Stacey, David, Andrew, Reed, John K., Harbor Branch Oceanographic Institute
Date Issued: 2013
PURL: http://purl.flvc.org/fau/fd/FA00007506
Subject Headings: Marine parks and reserves, Deep sea corals, Benthos Habitat, Benthic animals, Underwater exploration
Format: Document (PDF)

HBOI Faculty Contributions (60)	+ -
HBOI Technical Reports (35)	+ -
FAU Theses and Dissertations (1)	+ -
Mesophotic Coral Reefs of Cuba (1)	+ -

Deep sea corals (17)	+ -
Oculinidae (16)	+ -
Benthos Habitat (10)	+ -
Marine natural products (10)	+ -
Marine parks and reserves (9)	+ -

Sponges (7)	+ -
Benthos (6)	+ -
Pulley Ridge (6)	+ -
Benthic animals (5)	+ -
Scleractinia (5)	+ -
Underwater exploration (5)	+ -
Bioactive compounds (4)	+ -
Biodiversity--Research (4)	+ -
Biomedical Research (4)	+ -
Corals Ecology (4)	+ -
Biomedical research (3)	+ -
Coral reef ecology (3)	+ -
Coral reef ecology --Florida (3)	+ -
Coral reefs (3)	+ -
Corals (3)	+ -
Dry Tortugas (Fla.) (3)	+ -
Florida, Straits of (3)	+ -
Marine habitat conservation (3)	+ -
Marine metabolites (3)	+ -
Marine protected areas (3)	+ -
Oceanographic submersibles (3)	+ -
Octocorallia (3)	+ -
Porifera (3)	+ -
Southeastern United States (3)	+ -
Submersibles (3)	+ -

article (60)	+ -
technical report (36)	+ -
Electronic Thesis or Dissertation (1)	+ -

Farrington, Stephanie (24)	+ -
Harbor Branch Oceanographic Institute (24)	+ -
Pomponi, Shirley A. (23)	+ -
Harter, Stacey (16)	+ -
Wright, Amy E. (16)	+ -

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