Current Search: Nucleotide sequence--Databases (x)
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Title
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Binary representation of DNA sequences towards developing useful algorithms in bioinformatic data-mining.
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Creator
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Pandya, Shivani., Florida Atlantic University, Neelakanta, Perambur S., College of Engineering and Computer Science, Department of Computer and Electrical Engineering and Computer Science
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Abstract/Description
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This thesis refers to a research addressing the use of binary representation of the DNA for the purpose of developing useful algorithms for Bioinformatics. Pertinent studies address the use of a binary form of the DNA base chemicals in information-theoretic base so as to identify symmetry between DNA and complementary DNA. This study also refers to "fuzzy" (codon-noncodon) considerations in delinating codon and noncodon regimes in a DNA sequences. The research envisaged further includes a...
Show moreThis thesis refers to a research addressing the use of binary representation of the DNA for the purpose of developing useful algorithms for Bioinformatics. Pertinent studies address the use of a binary form of the DNA base chemicals in information-theoretic base so as to identify symmetry between DNA and complementary DNA. This study also refers to "fuzzy" (codon-noncodon) considerations in delinating codon and noncodon regimes in a DNA sequences. The research envisaged further includes a comparative analysis of the test results on the aforesaid efforts using different statistical metrics such as Hamming distance Kullback-Leibler measure etc. the observed details supports the symmetry aspect between DNA and CDNA strands. It also demonstrates capability of identifying non-codon regions in DNA even under diffused (overlapped) fuzzy states.
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Date Issued
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2003
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PURL
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http://purl.flvc.org/fcla/dt/13089
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Subject Headings
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Bioinformatics, Data mining, Nucleotide sequence--Databases, Computer algorithms
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Format
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Document (PDF)
