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WHOLE MITOCHONDRIAL GENOMES OF WILD CERCOPITHECUS MONKEYS FROM THE CONGO BASIN

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Date Issued:
2022
Abstract/Description:
Bioinformatics tools applied to large-scale genomic datasets have helped develop our understanding of primate phylogenetics. However, it is becoming increasingly evident that biological data are accumulating faster than the current capacity of the bioanthropological community to analyze, integrate, and mine the data. Subsequently, this affects how anthropologists create and distribute knowledge. There is a growing need for more training in bioinformatics within anthropological spaces and the development of user-friendly bioinformatic tools for analysis, mining, and modeling of both local and global datasets. This thesis showcases the use of (applied) bioinformatics tools to construct seven new whole mitochondrial genomes to study primate variation. Furthermore, this thesis entails an investigation of the guenon radiation to develop and document bioinformatics and statistical tools to perform a phylogenetic analysis of the genus Cercopithecus. Finally, the utility of the pipelines for other researchers in the Detwiler Lab Group and the potential for further phylogenetic studies are discussed.
Title: WHOLE MITOCHONDRIAL GENOMES OF WILD CERCOPITHECUS MONKEYS FROM THE CONGO BASIN.
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Name(s): Parke, Stacy-Anne, author
Detwiler, Kate M. , Thesis advisor
Florida Atlantic University, Degree grantor
Department of Anthropology
Dorothy F. Schmidt College of Arts and Letters
Type of Resource: text
Genre: Electronic Thesis Or Dissertation
Date Created: 2022
Date Issued: 2022
Publisher: Florida Atlantic University
Place of Publication: Boca Raton, Fla.
Physical Form: application/pdf
Extent: 75 p.
Language(s): English
Abstract/Description: Bioinformatics tools applied to large-scale genomic datasets have helped develop our understanding of primate phylogenetics. However, it is becoming increasingly evident that biological data are accumulating faster than the current capacity of the bioanthropological community to analyze, integrate, and mine the data. Subsequently, this affects how anthropologists create and distribute knowledge. There is a growing need for more training in bioinformatics within anthropological spaces and the development of user-friendly bioinformatic tools for analysis, mining, and modeling of both local and global datasets. This thesis showcases the use of (applied) bioinformatics tools to construct seven new whole mitochondrial genomes to study primate variation. Furthermore, this thesis entails an investigation of the guenon radiation to develop and document bioinformatics and statistical tools to perform a phylogenetic analysis of the genus Cercopithecus. Finally, the utility of the pipelines for other researchers in the Detwiler Lab Group and the potential for further phylogenetic studies are discussed.
Identifier: FA00014041 (IID)
Degree granted: Thesis (MA)--Florida Atlantic University, 2022.
Collection: FAU Electronic Theses and Dissertations Collection
Note(s): Includes bibliography.
Subject(s): Cercopithecus
Bioinformatics
Monkeys
Congo
Persistent Link to This Record: http://purl.flvc.org/fau/fd/FA00014041
Use and Reproduction: Copyright © is held by the author with permission granted to Florida Atlantic University to digitize, archive and distribute this item for non-profit research and educational purposes. Any reuse of this item in excess of fair use or other copyright exemptions requires permission of the copyright holder.
Host Institution: FAU
Is Part of Series: Florida Atlantic University Digital Library Collections.