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Title: Characterization of Mesophotic Coral/Sponge Habitats and Fish Assemblages in the Regions of Pulley Ridge and Tortugas from ROV Dives during R/V Walton Smith Cruises of 2012 to 2015.
Creator: Reed, John K., Farrington, Stephanie, David, Andrew, Harter, Stacey, Moe, Heather, Horn, Lance, Taylor, Glenn, White, Jason, Voss, Joshua, Hanisak, M. Dennis, Diaz, Maria Cristina, Pomponi, Shirley A.
Abstract/Description: This report summarizes the remotely operated vehicle (ROV) surveys during four cruises from 2012 to 2015 which characterizes the mesophotic coral reef ecosystems at Pulley Ridge and Tortugas. This research is part of a grant funded by the NOAA National Centers for Coastal Ocean Science award NA11NOS4780045: “Connectivity of the Pulley Ridge - South Florida Coral Reef Ecosystem”. The University of Miami ship R/V Walton Smith was used along with the University of North Carolina at Wilmington ...
Show moreThis report summarizes the remotely operated vehicle (ROV) surveys during four cruises from 2012 to 2015 which characterizes the mesophotic coral reef ecosystems at Pulley Ridge and Tortugas. This research is part of a grant funded by the NOAA National Centers for Coastal Ocean Science award NA11NOS4780045: “Connectivity of the Pulley Ridge - South Florida Coral Reef Ecosystem”. The University of Miami ship R/V Walton Smith was used along with the University of North Carolina at Wilmington (UNCW) Super Phantom ROV and the National Marine Sanctuary Foundation (NMSF) Mohawk ROV. The cruises were a collaboration of the University of Miami, HBOI-CIOERT, NOAA Fisheries, and the UNCW-CIOERT Undersea Vehicles Program.
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Date Issued: 2017-04-26
PURL: http://purl.flvc.org/fau/fd/FAUIR000227
Format: Citation

Title: Characterization of the Mesophotic Benthic Habitat and Fish Assemblagesfrom ROV Dives on Pulley Ridge and Tortugas during 2012 and 2013 R/V Walton SmithCruises.
Creator: Farrington, Stephanie, Reed, John K., Moe, Heather, Harter, Stacey, Hanisak, M. Dennis, David, Andrew, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007508
Subject Headings: Pulley Ridge, Dry Tortugas (Fla.), Underwater exploration, Benthos Habitat, Coral communities, Fish populations
Format: Document (PDF)

Title: Characterization of the Mesophotic Coral Reefs in the Florida Keys National Marine Sanctuary.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute, Hanisak, M. Dennis, Pomponi, Shirley M.
Abstract/Description: A 17-day research cruise was conducted to the Florida Keys National Marine Sanctuary (FKNMS), August 12-29, 2019 by the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) aboard the University of Miami ship R/V F.G. Walton Smith. Harbor Branch Oceanographic Institute Technical Report Number 198.
Date Issued: 2021
PURL: http://purl.flvc.org/fau/fd/FAUIR000420
Format: Document (PDF)

Title: Connectivity of the Pulley Ridge - South Florida Coral Reef Ecosystem:Processes to Decision-Support Tools.
Creator: Farrington, Stephanie, Reed, John K., Hanisak, M. Dennis, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007509
Subject Headings: Pulley Ridge, Coral reef ecology--Florida, Underwater exploration
Format: Document (PDF)

Title: Cruise Report. Cuba's Twilight Zone Reefs: Remotely Operated Vehicle Surveys of Deep/Mesophotic Coral Reefs and Associated Fish Communities of Cuba.
Creator: Reed, John K., Farrington, Stephanie, Gonzalez-Diaz, Patricia, Lopez, Linnet Busutil, Martínez-Daranas, Beatriz, Cobián Rojas, Dorka, Voss, Joshua, Hanisak, M. Dennis, Diaz, Maria Cristina, Jiang, Mingshun, Studivan, Michael, David, Andrew, Drummond, Felicia, Mendez, Juliett Gonzalez, Garcia Rodriguez, Alain, González-Sanchez, Patricia M., Fernández, Jorge Viamontes, Pérez, Daniel Estrada, Horn, Lance, White, Jason, Pomponi, Shirley A.
Abstract/Description: The purpose of this research cruise was to discover and characterize, for the first time, the extent of mesophotic reefs along the entire coastline of Cuba, and to compare the health and connectivity (physical, genetic and ecological) among both mesophotic and previously well-characterized shallow reef systems in Cuba, the southeastern United States, and Gulf of Mexico (in particular, the FGBNMS and FKNMS). Moreover, the project will directly address a recommendation in the Report from...
Show moreThe purpose of this research cruise was to discover and characterize, for the first time, the extent of mesophotic reefs along the entire coastline of Cuba, and to compare the health and connectivity (physical, genetic and ecological) among both mesophotic and previously well-characterized shallow reef systems in Cuba, the southeastern United States, and Gulf of Mexico (in particular, the FGBNMS and FKNMS). Moreover, the project will directly address a recommendation in the Report from MarCuba (2015) in which the U.S. and Cuban participants in this project stated their intention to initiate an international collaboration.
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Date Issued: 2017-10-31
PURL: http://purl.flvc.org/fau/fd/FAUIR000226
Format: Citation

Title: Cruise Report: EX-19-07, 2019 Southeastern U.S. Deep-sea Exploration (Mapping & ROV).
Creator: White, Michael P., Farrington, Stephanie, Galvez, Kimberly, Hoy, Shannon, Newman, Madalyn
Abstract/Description: From October 31 to November 20, 2019 the NOAA Office of Ocean Exploration and Research (OER) conducted the 2019 Southeastern U.S. Deep-sea Exploration remotely operated vehicle (ROV) and mapping cruise (EX1907) from Miami, Florida, to Key West, Florida. Twelve ROV dives were completed, and over 12,700 square kilometers were mapped during this expedition. This report includes an expedition overview, participant lists, the methodology, clearance and permit information, the schedule, and results...
Show moreFrom October 31 to November 20, 2019 the NOAA Office of Ocean Exploration and Research (OER) conducted the 2019 Southeastern U.S. Deep-sea Exploration remotely operated vehicle (ROV) and mapping cruise (EX1907) from Miami, Florida, to Key West, Florida. Twelve ROV dives were completed, and over 12,700 square kilometers were mapped during this expedition. This report includes an expedition overview, participant lists, the methodology, clearance and permit information, the schedule, and results of dives, sampling, and mapping operations and education and outreach activities. All data will be archived and made publicly available.
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Date Issued: 2019
PURL: http://purl.flvc.org/fau/fd/FAUIR000408
Format: Document (PDF)

Title: Morphological Diagnoses of Sponges Collected at Shelf-edge MPAs from Eastern Florida to North Carolina, between depths of 51 and 150 m, during CIOERT Expeditions (2018-2019).
Creator: Diaz Ronda, Maria Cristina, Farrington, Stephanie, Reed, John K., Pomponi, Shirley A.
Abstract/Description: This paper is a result of the taxonomic analyses of the sponges collected during the NOAA Ship Pisces expeditions in 2018 and 2019 with the University of North Carolina, Wilmington (UNCW) Mohawk ROV. This is part of a 9-year project conducted by NOAA National Marine Fisheries (NMF) in collaboration with the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) to document and monitor the...
Show moreThis paper is a result of the taxonomic analyses of the sponges collected during the NOAA Ship Pisces expeditions in 2018 and 2019 with the University of North Carolina, Wilmington (UNCW) Mohawk ROV. This is part of a 9-year project conducted by NOAA National Marine Fisheries (NMF) in collaboration with the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) to document and monitor the Marine Protected Areas (MPAs) of the southeastern U.S. continental shelf (eastern Florida to North Carolina, 50-165 m deep). The most prominent and conspicuous sponges were collected with the intention of evaluating the biodiversity of this important benthic group in these mesophotic habitats. Eleven sponge samples were collected, and taxonomic evaluation, studying the internal and external morphology, resulted in: 1) three well recognized species from the Tropical Western Atlantic (Leiodermatium lynceus, Neofibularia nolitangere, Clathria foliacea), 2) four species with sibling recognized species but with major morphological differences that might require the description of new species (Epipolasis cf. profunda, Cliona cf. tumula, Cliona aff. celata), and 3) three species that only could receive generic assignations (Penares sp.1, Clathria sp.1, and Aaptos sp.1). These results show that more than half of the species collected represent unknown species to science, or unknown variations of recognized species. Careful comparison with species types and observations of spicules under SEM would allow the necessary evidence to characterize and classify these new species or varieties. We suggest further characterization of these novel fauna considering their level of abundance and distribution in the MPAs studied. A synoptic description of each species studied, with live, deck and microscopy photographs is here presented.
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Date Issued: 2018 - 2019
PURL: http://purl.flvc.org/fau/fd/FAUIR000407
Format: Document (PDF)

Title: NOAA CIOERT Cruise Report South Atlantic MPAs and Oculina HAPC: Characterization of Benthic Habitat and Biota.
Creator: Harter, Stacey, David, Andrew, Reed, John K., Farrington, Stephanie, Drummond, Felicia
Abstract/Description: The South Atlantic Fishery Management Council (SAFMC) and Department of Commerce through the Magnuson-Stevens Fishery Management Act have established eight deepwater Marine Protected Areas (MPAs), five Deepwater Coral Habitat Areas of Particular Concern (CHAPCs), and the Oculina Coral HAPC off of the southeastern U.S. This project proposes to document and characterize the benthic habitat, benthic sessile biota, and fish populations within some of these protected areas and within the...
Show moreThe South Atlantic Fishery Management Council (SAFMC) and Department of Commerce through the Magnuson-Stevens Fishery Management Act have established eight deepwater Marine Protected Areas (MPAs), five Deepwater Coral Habitat Areas of Particular Concern (CHAPCs), and the Oculina Coral HAPC off of the southeastern U.S. This project proposes to document and characterize the benthic habitat, benthic sessile biota, and fish populations within some of these protected areas and within the jurisdiction of the SAFMC. The Oculina Experimental Closed Area (OECA) was established in 1994 and closed the area to all bottom fishing in order to evaluate the effectiveness of the reserve for management and conservation of snapper grouper populations. The OECA is located within the Oculina Habitat Area of Particular Concern (OHAPC) which was established in 1984 when the significance and value of Oculina varicosa to important fishery species was recognized by the SAFMC. The OHAPC doubled in size when the Northern and Western Extensions were added with the implementation of Amendment 8 of the Fishery Management Plan in August 2015. As part of the OECA Evaluation Plan, a re-evaluation of the area is currently in progress. Data collected from the current grant will provide crucial data needed for this re-evaluation.
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Date Issued: 2018
PURL: http://purl.flvc.org/fau/fd/FAUIR000406
Format: Document (PDF)

Title: NOAA CIOERT cruise report: Survey of the pulley ridge mesophotic reef ecosystem.
Creator: Reed, John K., Farrington, Stephanie, Pomponi, Shirley A., Hanisak, M. Dennis, Voss, Joshua
Date Issued: 2012-02-15
PURL: http://purl.flvc.org/fcla/dt/3360202
Subject Headings: Ocean exploration, Oceanography--Research, Corals Ecology, Deep sea corals
Format: Document (PDF)

Title: Photo album and taxonomy of benthic macrobiota and fish from 2011-2013 ROV dives on shelf-edge MPAs off southeastern U.S.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007512
Subject Headings: Marine parks and reserves, Southeastern United States, Taxonomy (Biology), Benthos
Format: Document (PDF)

Title: Photo album and taxonomy of benthic macrobiota from 2012-2013 ROV dives on Pulley Ridge mesophotic reefs.
Creator: Farrington, Stephanie, Reed, John K., Hanisak, M. Dennis, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007510
Subject Headings: Pulley Ridge, Benthos, Cnidaria--Classification, Coral reefs
Format: Document (PDF)

Title: Photo album and taxonomy of benthic macrobiota from 2012-2013 ROV dives on Tortugas mesophotic reefs.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007511
Subject Headings: Dry Tortugas (Fla.), Benthos, Cnidaria--Classification, Coral reefs
Format: Document (PDF)

Title: PHOTO IDENTIFICATION GUIDE OF THE BENTHIC TAXA INHABITING THE MESOPHOTIC REEFS OF THE FLORIDA KEYS NATIONAL MARINE SANCTUARY.
Creator: Reed, John K., Farrington, Stephanie, Pomponi, Shirley A., Diaz, Maria Cristina, Harbor Branch Oceanographic Institute, Hanisak, M. Dennis
Abstract/Description: A 17-day research cruise was conducted to the Florida Keys National Marine Sanctuary (FKNMS), August 12-29, 2019 by the Cooperative Institute for Ocean Exploration, Research, and Technology (CIOERT) at Harbor Branch Oceanographic Institute, Florida Atlantic University (HBOI-FAU) aboard the University of Miami ship R/V F.G. Walton Smith. Harbor Branch Oceanographic Institute Technical Report Number 197.
Date Issued: 2021
PURL: http://purl.flvc.org/fau/fd/FAUIR000419
Format: Document (PDF)

Title: Preliminary Cruise Report. 2015 HBOI-FAU Cruise. Mesophotic and deepwater reef ecosystems- ROV/AUV surveys of SW Florida Shelf including Northern Pulley Ridge and Howell Hook regions. May 7-20, 2015.
Creator: Reed, John K., Farrington, Stephanie, Pomponi, Shirley A., Price, Melissa, Harbor Branch Oceanographic Institute
Date Issued: 2015
PURL: http://purl.flvc.org/fau/fd/FA00007518
Subject Headings: Deep sea corals, Corals--Ecology, Pulley Ridge, Continental shelf--Florida
Format: Document (PDF)

Title: Proposal to Gulf of Mexico Fishery Management Council and FKNMS: Mesophotic reefs outside of the Tortugas Ecological Reserves.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007521
Subject Headings: Dry Tortugas (Fla.), Coral reefs
Format: Document (PDF)

Title: Proposal to Gulf of Mexico Fishery Management Council: Proposed Pulley Ridge HAPC Extension. Presented to GOMFC- Coral Group Meeting Webinar, Dec. 4, 2014.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007520
Subject Headings: Pulley Ridge, Gulf of Mexico Fishery Management Council, Marine habitat conservation
Format: Document (PDF)

Title: Proposed HAPCs/MPAs for mesophotic and deepwater coral/sponge habitat and essential fish habitat in the eastern Gulf of Mexico. A proposal to the Gulf of Mexico Fishery Management Council. GOMFMC Webinar, September 22, 2014.
Creator: Reed, John K., Farrington, Stephanie, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007513
Subject Headings: Marine parks and reserves Mexico, Sponges--Mexico, Gulf of, Deep sea corals, Fishes--Habitat
Format: Document (PDF)

Title: South Atlantic MPAs and deepwater coral HAPCs: Characterization of Benthic Habitat and Biota; NOAA Ship Pisces 2013 cruise. NOAA CIOERT Report.
Creator: Reed, John K., Harter, Stacey, Farrington, Stephanie, David, Andrew, Harbor Branch Oceanographic Institute
Date Issued: 2014
PURL: http://purl.flvc.org/fau/fd/FA00007514
Subject Headings: Marine parks and reserves, Deep sea corals, Benthos Habitat, NOAA Ship Pisces
Format: Document (PDF)

Title: South Atlantic MPAs and deepwater coral HAPCs: Characterization of benthic habitat, benthic macrobiota, and fish communities; NOAA Ship Nancy Foster 2014 cruise. NOAA CIOERT Report.
Creator: Reed, John K., Farrington, Stephanie, Harter, Stacey, Harbor Branch Oceanographic Institute
Date Issued: 2015
PURL: http://purl.flvc.org/fau/fd/FA00007515
Subject Headings: Marine parks and reserves, Deep sea corals, Benthos Habitat, Fish communities
Format: Document (PDF)

Title: South Atlantic MPAs and deepwater coral HAPCs: Characterization of fish communities, benthic habitat, and benthic macrobiota. Final Report for 2012-2014 NOAA Cruises. A NOAA CIOERT Report.
Creator: Harter, Stacey, Reed, John K., Farrington, Stephanie, David, Andrew, Harbor Branch Oceanographic Institute
Date Issued: 2015
PURL: http://purl.flvc.org/fau/fd/FA00007516
Subject Headings: Marine parks and reserves, Deep sea corals, Benthos Habitat, Fish communities, South Atlantic Fishery Management Council (U.S.)
Format: Document (PDF)

HBOI Technical Reports (25)	+ -
Mesophotic Coral Reefs of Cuba (1)	+ -

Deep sea corals (7)	+ -
Marine parks and reserves (6)	+ -
Benthos Habitat (5)	+ -
Pulley Ridge (5)	+ -
Benthos (4)	+ -

Coral reefs (3)	+ -
Dry Tortugas (Fla.) (3)	+ -
Underwater exploration (3)	+ -
Cnidaria--Classification (2)	+ -
Fish communities (2)	+ -
NOAA Ship Pisces (2)	+ -
Benthic animals (1)	+ -
Continental shelf--Florida (1)	+ -
Coral communities (1)	+ -
Coral reef ecology--Florida (1)	+ -
Corals Ecology (1)	+ -
Corals--Ecology (1)	+ -
Fish populations (1)	+ -
Fishes--Habitat (1)	+ -
Gulf of Mexico Fishery Management Council (1)	+ -
Marine habitat conservation (1)	+ -
Marine parks and reserves Mexico (1)	+ -
Mohawk, Ship (1)	+ -
Ocean exploration (1)	+ -
Oceanography--Research (1)	+ -
Oculinidae (1)	+ -
South Atlantic Fishery Management Council (U.S.) (1)	+ -
Southeastern United States (1)	+ -
Sponges--Mexico, Gulf of (1)	+ -
Taxonomy (Biology) (1)	+ -

Reed, John K. (24)	+ -
Harbor Branch Oceanographic Institute (17)	+ -
Harter, Stacey (11)	+ -
David, Andrew (10)	+ -
Hanisak, M. Dennis (8)	+ -

Pomponi, Shirley A. (6)	+ -
Diaz, Maria Cristina (3)	+ -
Voss, Joshua (3)	+ -
Drummond, Felicia (2)	+ -
Horn, Lance (2)	+ -
Moe, Heather (2)	+ -
White, Jason (2)	+ -
Cobián Rojas, Dorka (1)	+ -
Diaz Ronda, Maria Cristina (1)	+ -
Fernández, Jorge Viamontes (1)	+ -
Galvez, Kimberly (1)	+ -
Garcia Rodriguez, Alain (1)	+ -
Gonzalez-Diaz, Patricia (1)	+ -
González-Sanchez, Patricia M. (1)	+ -
Hoy, Shannon (1)	+ -
Jiang, Mingshun (1)	+ -
Lopez, Linnet Busutil (1)	+ -
Martínez-Daranas, Beatriz (1)	+ -
Mendez, Juliett Gonzalez (1)	+ -
Newman, Madalyn (1)	+ -
Pomponi, Shirley M. (1)	+ -
Price, Melissa (1)	+ -
Pérez, Daniel Estrada (1)	+ -
Studivan, Michael (1)	+ -

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