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WHOLE MITOCHONDRIAL GENOMES OF WILD CERCOPITHECUS MONKEYS FROM THE CONGO BASIN
- Date Issued:
- 2022
- Abstract/Description:
- Bioinformatics tools applied to large-scale genomic datasets have helped develop our understanding of primate phylogenetics. However, it is becoming increasingly evident that biological data are accumulating faster than the current capacity of the bioanthropological community to analyze, integrate, and mine the data. Subsequently, this affects how anthropologists create and distribute knowledge. There is a growing need for more training in bioinformatics within anthropological spaces and the development of user-friendly bioinformatic tools for analysis, mining, and modeling of both local and global datasets. This thesis showcases the use of (applied) bioinformatics tools to construct seven new whole mitochondrial genomes to study primate variation. Furthermore, this thesis entails an investigation of the guenon radiation to develop and document bioinformatics and statistical tools to perform a phylogenetic analysis of the genus Cercopithecus. Finally, the utility of the pipelines for other researchers in the Detwiler Lab Group and the potential for further phylogenetic studies are discussed.
Title: | WHOLE MITOCHONDRIAL GENOMES OF WILD CERCOPITHECUS MONKEYS FROM THE CONGO BASIN. |
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Name(s): |
Parke, Stacy-Anne, author Detwiler, Kate M. , Thesis advisor Florida Atlantic University, Degree grantor Department of Anthropology Dorothy F. Schmidt College of Arts and Letters |
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Type of Resource: | text | |
Genre: | Electronic Thesis Or Dissertation | |
Date Created: | 2022 | |
Date Issued: | 2022 | |
Publisher: | Florida Atlantic University | |
Place of Publication: | Boca Raton, Fla. | |
Physical Form: | application/pdf | |
Extent: | 75 p. | |
Language(s): | English | |
Abstract/Description: | Bioinformatics tools applied to large-scale genomic datasets have helped develop our understanding of primate phylogenetics. However, it is becoming increasingly evident that biological data are accumulating faster than the current capacity of the bioanthropological community to analyze, integrate, and mine the data. Subsequently, this affects how anthropologists create and distribute knowledge. There is a growing need for more training in bioinformatics within anthropological spaces and the development of user-friendly bioinformatic tools for analysis, mining, and modeling of both local and global datasets. This thesis showcases the use of (applied) bioinformatics tools to construct seven new whole mitochondrial genomes to study primate variation. Furthermore, this thesis entails an investigation of the guenon radiation to develop and document bioinformatics and statistical tools to perform a phylogenetic analysis of the genus Cercopithecus. Finally, the utility of the pipelines for other researchers in the Detwiler Lab Group and the potential for further phylogenetic studies are discussed. | |
Identifier: | FA00014041 (IID) | |
Degree granted: | Thesis (MA)--Florida Atlantic University, 2022. | |
Collection: | FAU Electronic Theses and Dissertations Collection | |
Note(s): | Includes bibliography. | |
Subject(s): |
Cercopithecus Bioinformatics Monkeys Congo |
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Persistent Link to This Record: | http://purl.flvc.org/fau/fd/FA00014041 | |
Use and Reproduction: | Copyright © is held by the author with permission granted to Florida Atlantic University to digitize, archive and distribute this item for non-profit research and educational purposes. Any reuse of this item in excess of fair use or other copyright exemptions requires permission of the copyright holder. | |
Host Institution: | FAU | |
Is Part of Series: | Florida Atlantic University Digital Library Collections. |